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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015890995.1_cds_XP_016445700.1_40636
CDS Infomation

[gene=LOC107770883] [db_xref=GeneID:107770883] [protein=lysM domain-containing GPI-anchored protein 1-like] [protein_id=XP_016445700.1] [location=join(6560..7223,8739..8856,8934..9095,9206..9237,9961..10238)] [gbkey=CDS]
Sequence

ATGCAACATTTCTTCTTCACCATATTCCTACTGTTGAGCAGCAGCTGCTTCATCTATCAA
ACAACCTCAAAATCCACCATTGAGCCATGTTCCAACTCTGATACTTGCTCTTCACTTGTT
GGCTACACACTTTACACTGACCTCAAAGTTTCTGAGGTGGCCTCACTCTTTCAAACTGAC
CCAATCTCTCTTCTCACTACCAATGCTATTGATATCTCGTACCCTGATGTTGAAAACCAC
ATACTTCCAGCTAAATTGTTCCTTAAAGTTCCTGTTACATGTTCTTGTGTTGATGGGATC
TTTAAGTCTGCTTTTGTACATTACAAGACTAGGCCTTCAGATACTTTGTCTTTGATTGCT
GACACTGTATATGGTGGTCTTGTTTCTGCTGACCAGATTAAGGAAGGGAATCCTAGTGCT
GTTGGTTCTGATCCTTCAGTGCTTAATGTTGGGACTAACCTTTGGATTCCACTTCCTTGC
ACTTGCTTTAATGGGACTGACAATAATCTGCCTGCTATTTATATGTCATATGTTGTTAGA
CCTGTGGATACTCTTGCAGGGATTGCTGCTAGGTATTCCACTACTCTTACTGATCTTATG
AATGTCAATGCTTTGGGCAGTCCTGCTATTAAGGAGGATGACATTCTTGCCATTCCCTTG
TCTGCTTGTGCATCTAGCTTCCCAAGATTTGCCTCAGATTATGCCTTATCTGTTGCGAAC
GGGAGCTATGCTATTACAGCTAGCCACTGTGTGCAATGCAGTTGCGGACCAGGAAGTCGG
AATTTGTACTGCATGCCAGCTTCCTTAGCAGTTTCTTGCTCAAGCATGCAGTGCAAGAGC
AGCAATCTCATGCTCGGAAATGTTACTGTACAACAAACTGGCGGTGGTTGCAATGTGACT
TCTTGTAATTATGGTGGCTTTGTCAATGGAACCATCATCACTACATTATCCTCATCTCTT
CAACCTCGATGCCCAGGACCGCAACAATTTCCTCCACTTGTTGTCCCACCTACATCGGTA
GGCCCAGACGTAATGTTTGCTCCTGCTCCTTCACCTTCTGAATCTGGTGGTGCTCCAATG
GATGGTCCACATTCTTCCGTGGTGCCTGCATCTGGCTCAGTTATCGCATTTCCACCTTCA
GGTGGACCAAGTGGAAGTGCATCTTCTGCTTGCTTGTTGAACCCTTTAGCTAGTTTTCCA
ATTGCAATTCTCTTGTATCTGTGTGTGAAATATGTGATCTCACTTCCGTTATGA

Peptide Sequence

PEP ID

XP_016445700.1
PEP Infomation

PREDICTED: lysM domain-containing GPI-anchored protein 1-like [Nicotiana tabacum]
Sequence

MQHFFFTIFLLLSSSCFIYQTTSKSTIEPCSNSDTCSSLVGYTLYTDLKVSEVASLFQTD
PISLLTTNAIDISYPDVENHILPAKLFLKVPVTCSCVDGIFKSAFVHYKTRPSDTLSLIA
DTVYGGLVSADQIKEGNPSAVGSDPSVLNVGTNLWIPLPCTCFNGTDNNLPAIYMSYVVR
PVDTLAGIAARYSTTLTDLMNVNALGSPAIKEDDILAIPLSACASSFPRFASDYALSVAN
GSYAITASHCVQCSCGPGSRNLYCMPASLAVSCSSMQCKSSNLMLGNVTVQQTGGGCNVT
SCNYGGFVNGTIITTLSSSLQPRCPGPQQFPPLVVPPTSVGPDVMFAPAPSPSESGGAPM
DGPHSSVVPASGSVIAFPPSGGPSGSASSACLLNPLASFPIAILLYLCVKYVISLPL

Transcript Sequence

Gene sequence data has not been registered.